Files in DESeq
Differential gene expression analysis based on the negative binomial distribution
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
src/pval.c
R/core.R
R/class_and_slots.R
R/plotDispEsts.R
R/welcome.R
R/methods.R
vignettes/DESeq.Rnw
vignettes/vst.nb
vignettes/vst.pdf
vignettes/whbiocvignette.sty
vignettes/DESeq.bib
man/adjustScvForBias.Rd
man/estimateVarianceFunctions.Rd
man/fitInfo.Rd
man/sizeFactors.Rd
man/estimateSizeFactorsForMatrix.Rd
man/nbinomTest.Rd
man/newCountDataSetFromHTSeqCount.Rd
man/estimateDispersions.Rd
man/getBaseMeansAndVariances.Rd
man/counts.Rd
man/CountDataSet-class.Rd
man/plotPCA.Rd
man/getVarianceStabilizedData.Rd
man/makeExampleCountDataSet.Rd
man/nbkd.sf.Rd
man/scvPlot.Rd
man/fitNbinomGLMs.Rd
man/fitNbinomGLMsForMatrix.Rd
man/nbinomGLMTest.Rd
man/dispTable.Rd
man/conditions.Rd
man/newCountDataSet.Rd
man/varianceFitDiagnostics.Rd
man/nbinomTestForMatrices.Rd
man/estimateSizeFactors.Rd
man/plotMA.Rd
man/residualsEcdfPlot.Rd
man/plotDispEsts.Rd
inst/CITATION
inst/doc/DESeq.Rnw
inst/doc/DESeq.R
inst/doc/DESeq.pdf
inst/extra/TagSeqExample.tab
inst/extra/scvBiasCorrectionFits.rda
inst/scripts/testVarianceStabilizingTransformation.R
