This package implements several functions useful for analysis of gene expression data by sequencing tags as done in SAGE (Serial Analysis of Gene Expressen) data, i.e. extraction of a SAGE library from sequence files, sequence error correction, library comparison. Sequencing error correction is implementing using an Expectation Maximization Algorithm based on a Mixture Model of tag counts.
|Author||Tim Beissbarth <[email protected]>, with contributions from Gordon Smyth <[email protected]> and Lavinia Hyde <[email protected]>.|
|Maintainer||Tim Beissbarth <[email protected]>|
|License||GPL (>= 2)|
|Package repository||View on Bioconductor|
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