| bayespeak | BayesPeak - Bayesian analysis of ChIP-seq data |
| overfitting | Overfitting diagnostic functions |
| plot.bed | Plot bed file. |
| plot.job | Plot the called peaks in a job. |
| plot.PP | Job PP plot. |
| raw.output | Example raw.output object |
| raw.output.H3K4me3 | Example raw.output object from H3K4me3 data |
| read.bed | BayesPeak - Bayesian analysis of ChIP-seq data |
| summarise.peaks | Summarize Peaks |
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