Job PP plot.
Plot the PP profile of a particular job.
Raw output from the
Integer. Which of the jobs in the output should have its PP values plotted?
Integer. Analogous to the breaks argument in
Additional arguments passed to the
plot.PP plots a histogram of the PP values returned in a particular BayesPeak job. This can be used to identify overfitting in a particular job. It is not suitable for identifying the prevalence of overfitting in all of the jobs in a genome-wide analysis - for that, please see
Plots a histogram on the active graphical device.
Spyrou C, Stark R, Lynch AG, Tavare S BayesPeak: Bayesian analysis of ChIP-seq data, BMC Bioinformatics 2009, 10:299 doi:10.1186/1471-2105-10-299
1 2 3 4 5
Want to suggest features or report bugs for rdrr.io? Use the GitHub issue tracker.