BicARE: Biclustering Analysis and Results Exploration

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Biclustering Analysis and Results Exploration

Author
Pierre Gestraud
Date of publication
None
Maintainer
Pierre Gestraud <pierre.gestraud@curie.fr>
License
GPL-2
Version
1.32.0
URLs

View on Bioconductor

Man pages

BicARE-package
BicARE
bicluster
Extract a bicluster
FLOC
Performs the FLOC algorithm
makeReport
Export the results as html files
residue
Residue of a matrix
sample.bicData
Example data set for BicARE
sample.biclustering
Example biclustering object
testAnnot
Find samples annotations over-represented covariates in...
testSet
Find gene sets that are enriched in a bicluster

Files in this package

BicARE/DESCRIPTION
BicARE/NAMESPACE
BicARE/R
BicARE/R/FLOC.R
BicARE/R/bicluster.R
BicARE/R/makeReport.R
BicARE/R/plot.bicluster.R
BicARE/R/print.biclustering.R
BicARE/R/residue.R
BicARE/R/testAnnot.R
BicARE/R/testSet.R
BicARE/build
BicARE/build/vignette.rds
BicARE/data
BicARE/data/sample.bicData.RData
BicARE/data/sample.biclustering.RData
BicARE/inst
BicARE/inst/doc
BicARE/inst/doc/BicARE.R
BicARE/inst/doc/BicARE.Rnw
BicARE/inst/doc/BicARE.pdf
BicARE/inst/report
BicARE/inst/report/bic.html
BicARE/inst/report/bicare.css
BicARE/inst/report/covar.html
BicARE/inst/report/geneSets.html
BicARE/inst/report/home.html
BicARE/inst/report/listBic.html
BicARE/man
BicARE/man/BicARE-package.Rd
BicARE/man/FLOC.Rd
BicARE/man/bicluster.Rd
BicARE/man/makeReport.Rd
BicARE/man/residue.Rd
BicARE/man/sample.bicData.Rd
BicARE/man/sample.biclustering.Rd
BicARE/man/testAnnot.Rd
BicARE/man/testSet.Rd
BicARE/src
BicARE/src/BicARE.c
BicARE/vignettes
BicARE/vignettes/BicARE.Rnw
BicARE/vignettes/biblio.bib