API for BubbleTree
BubbleTree: an intuitive visualization to elucidate tumoral aneuploidy and clonality in somatic mosaicism using next generation sequencing data
| Global functions | |
|---|---|
| Annotate | Man page |
| Annotate-package | Man page |
| BTreePlotter | Man page |
| BTreePlotter-package | Man page |
| BTreePredictor | Man page |
| BTreePredictor-package | Man page |
| RBD | Man page |
| RBD-package | Man page |
| RscoreTrack | Man page Man page |
| RscoreTrack,TrackPlotter-method | Man page |
| TrackPlotter | Man page |
| TrackPlotter-package | Man page |
| all.somatic.lst | Man page |
| allCNV.lst | Man page |
| allCall.lst | Man page |
| allHetero.lst | Man page |
| allRBD.lst | Man page |
| annoByGenesAndCyto | Man page Man page |
| annoByGenesAndCyto,Annotate-method | Man page |
| bafTrack | Man page Man page |
| bafTrack,TrackPlotter-method | Man page |
| btcompare | Man page Source code |
| btpredict | Man page Man page |
| btpredict,BTreePredictor-method | Man page |
| cancer.genes.minus2 | Man page |
| centromere.dat | Man page |
| cnv.gr | Man page |
| cyto.gr | Man page |
| dat2gr | Source code |
| def | Source code Source code |
| drawBTree | Man page Man page |
| drawBTree,BTreePlotter-method | Man page |
| drawBubbles | Man page Man page |
| drawBubbles,BTreePlotter-method | Man page |
| drawFeatures | Man page Man page |
| drawFeatures,BTreePlotter-method | Man page |
| gene.uni.clean.gr | Man page |
| getTracks | Man page Source code |
| heteroLociTrack | Man page Man page |
| heteroLociTrack,TrackPlotter-method | Man page |
| hg19.seqinfo | Man page |
| info | Man page Man page |
| info,BTreePredictor-method | Man page |
| keep24chr | Source code |
| loadRBD | Man page Man page |
| loadRBD,BTreePredictor-method | Man page |
| makeRBD | Man page Man page |
| makeRBD,RBD-method | Man page |
| mergeSnpCnv | Man page Man page |
| mergeSnpCnv,RBD-method | Man page |
| saveXLS | Man page Source code |
| snp.gr | Man page |
| trackBTree | Man page Man page |
| trackBTree,BTreePlotter-method | Man page |
| vol.genes | Man page |
| xyTrack | Man page Man page |
| xyTrack,TrackPlotter-method | Man page |
