Files in BubbleTree
BubbleTree: an intuitive visualization to elucidate tumoral aneuploidy and clonality in somatic mosaicism using next generation sequencing data

Rprofile
DESCRIPTION
NAMESPACE
inst/NEWS
inst/doc/BubbleTree-vignette.Rmd inst/doc/BubbleTree-vignette.R
inst/doc/BubbleTree-vignette.html
vignettes/BubbleTree-vignette.Rmd
vignettes/figures/HCC11_Primary_with_ann.png
R/Annotate.R R/Utils.R R/BTreePlotter.R R/RBD.R R/TrackPlotter.R R/BTreePredictor.R man/saveXLS.Rd man/vol.genes.Rd man/allRBD.lst.Rd man/drawBubbles.Rd man/cyto.gr.Rd man/RBD.Rd man/Annotate.Rd man/trackBTree.Rd man/allHetero.lst.Rd man/TrackPlotter.Rd man/RscoreTrack.Rd man/cnv.gr.Rd man/loadRBD.Rd man/mergeSnpCnv.Rd man/hg19.seqinfo.Rd man/annoByGenesAndCyto.Rd man/allCall.lst.Rd man/bafTrack.Rd man/cancer.genes.minus2.Rd man/heteroLociTrack.Rd man/btpredict.Rd man/drawFeatures.Rd man/makeRBD.Rd man/snp.gr.Rd man/allCNV.lst.Rd man/drawBTree.Rd man/gene.uni.clean.gr.Rd man/centromere.dat.Rd man/info.Rd man/getTracks.Rd man/BTreePredictor.Rd man/btcompare.Rd man/all.somatic.lst.Rd man/xyTrack.Rd man/BTreePlotter.Rd examples/drawBubbles-Ex.R examples/xyTrack-Ex.R examples/btpredict-Ex.R examples/annoByGenesAndCyto-Ex.R examples/RscoreTrack-Ex.R examples/info-Ex.R examples/btcompare-Ex.R examples/drawFeatures-Ex.R examples/getTracks-Ex.R examples/saveXLS-Ex.R examples/trackBTree-Ex.R examples/heteroLociTrack-Ex.R examples/loadRBD-Ex.R examples/bafTrack-Ex.R examples/drawBTree-Ex.R examples/makeRBD-Ex.R
build/vignette.rds
data/allCNV.lst.RData
data/allRBD.lst.RData
data/vol.genes.rda
data/allHetero.lst.RData
data/cyto.gr.rda
data/cancer.genes.minus2.rda
data/allCall.lst.RData
data/gene.uni.clean.gr.rda
data/centromere.dat.rda
data/cnv.gr.rda
data/all.somatic.lst.RData
data/snp.gr.rda
data/datalist
data/hg19.seqinfo.rda
BubbleTree documentation built on May 2, 2018, 2:40 a.m.