CGHcall: Calling aberrations for array CGH tumor profiles.

Calls aberrations for array CGH data using a six state mixture model as well as several biological concepts that are ignored by existing algorithms. Visualization of profiles is also provided.

Package details

AuthorMark van de Wiel, Sjoerd Vosse
Bioconductor views Microarray Preprocessing Visualization
MaintainerMark van de Wiel <mark.vdwiel@vumc.nl>
LicenseGPL (http://www.gnu.org/copyleft/gpl.html)
Version2.52.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CGHcall")

Try the CGHcall package in your browser

Any scripts or data that you put into this service are public.

CGHcall documentation built on Nov. 8, 2020, 11:12 p.m.