Files in CNORode
ODE add-on to CellNOptR

DESCRIPTION
NAMESPACE
inst/NEWS.Rd
inst/doc/CNORode-vignette.Rnw
inst/doc/CNORode-vignette.pdf
inst/doc/ToyModelMMB_FeedbackAnd.csv
inst/doc/ToyModelMMB_FeedbackAnd.sif
inst/doc/CNORode-vignette.R
vignettes/CNORode-vignette.Rnw
vignettes/ToyModelMMB_FeedbackAnd.png
vignettes/comp_tex.bat
vignettes/ToyModelMMB_FeedbackAnd.svg
vignettes/data_ToyModelMMB_FeddbackAnd.pdf R/getLBodeSimFunction.R R/getLBodeMINLPObjFunction.R R/createLBodeContPars.R R/parEstimationLBodeGA.R R/incidence2Adjacency.R R/zzz.R R/getLBodeModelSim.R R/getLBodeContObjFunction.R R/plotLBodeFitness.R R/getLBodeDataSim.R R/parEstimationLBode.R R/parEstimationLBodeSSm.R R/defaultParametersSSm.R R/getStates.R R/minlpLBodeSSm.R R/simdata2cnolist.R R/defaultParametersGA.R R/simulate.R R/plotLBodeModelSim.R
src/cvodea_io.c
src/sundials_math.c
src/get_input_index.c
src/sundials_dense.c
src/getAdjacencyMatrix.c
src/cvodes_io.c
src/printInterMat.c
src/sundials_band.c
src/cvodes_diag.c
src/cvodes_spbcgs.c
src/cvodes_direct.c
src/normHill.c
src/cvodes_impl.h
src/cvodes_bandpre_impl.h
src/decimal2binary.c
src/linear_transfer_function.c
src/cvodes.c
src/cvodes_dense.c
src/sundials_spbcgs.c
src/cvodes_band.c
src/sundials_sptfqmr.c
src/cvodes_spils.c
src/cvodes_spils_impl.h
src/cvodes_spgmr.c
src/printTruthTables.c
src/fnvector_serial.c
src/simulateODE.c
src/sundials_iterative.c
src/nvector_serial.c
src/get_truth_tables_index.c
src/cvodes_bbdpre.c
src/findStates.c
src/cvodes_bandpre.c
src/sundials_direct.c
src/getNumBits.c
src/sundials_spgmr.c
src/getStateIndex.c
src/sundials_nvector.c
src/cvodes_diag_impl.h
src/hill_function.c
src/printNminiTerms.c
src/get_support_truth_tables.c
src/get_count_bits.c
src/getTruthTables.c
src/Makevars
src/fnvector_serial.h
src/cvodes_direct_impl.h
src/cvodes_sptfqmr.c
src/cvodes_bbdpre_impl.h
src/cvodea.c
src/sim_logic_ode.c
src/getNumInputs.c
src/Toy_Model_MMB_Feedback_OriginalPars_C_test.h
src/CNOStructure.h
src/printAdjMat.c
src/rhsODE.c
src/include/nvector/nvector_serial.h
src/include/cvodes/cvodes_spgmr.h
src/include/cvodes/cvodes_dense.h
src/include/cvodes/cvodes_band.h
src/include/cvodes/cvodes_spils.h
src/include/cvodes/cvodes_spbcgs.h
src/include/cvodes/cvodes_diag.h
src/include/cvodes/cvodes_sptfqmr.h
src/include/cvodes/cvodes_bandpre.h
src/include/cvodes/cvodes.h
src/include/cvodes/cvodes_bbdpre.h
src/include/cvodes/cvodes_lapack.h
src/include/cvodes/cvodes_direct.h
src/include/sundials/sundials_nvector.h
src/include/sundials/sundials_sptfqmr.h
src/include/sundials/sundials_types.h
src/include/sundials/sundials_iterative.h
src/include/sundials/sundials_dense.h
src/include/sundials/sundials_lapack.h
src/include/sundials/sundials_math.h
src/include/sundials/sundials_band.h
src/include/sundials/sundials_spgmr.h
src/include/sundials/sundials_fnvector.h
src/include/sundials/sundials_config.h
src/include/sundials/sundials_spbcgs.h
src/include/sundials/sundials_direct.h
man/defaultParametersSSm.Rd man/plotLBodeFitness.Rd man/CNORode-package.Rd man/parEstimationLBode.Rd man/createLBodeContPars.Rd man/plotLBodeModelSim.Rd man/getLBodeModelSim.Rd man/model.Rd man/getLBodeContObjFunction.Rd man/minlpLBodeSSm.Rd man/getStates.Rd man/getLBodeDataSim.Rd man/simdata2cnolist.Rd man/getLBodeSimFunction.Rd man/cnolistCNORodeExample.Rd man/simulate.Rd man/indices.Rd man/parEstimationLBodeSSm.Rd man/parEstimationLBodeGA.Rd man/incidence2Adjacency.Rd man/getLBodeMINLPObjFunction.Rd man/defaultParametersGA.Rd
build/vignette.rds
data/ToyModel.RData
data/ToyIndices.RData
data/ToyCNOlist.RData
CNORode documentation built on May 2, 2018, 4:24 a.m.