API for COCOA
Coordinate Covariation Analysis

Global functions
.formatResults Source code
.makeSymmetric Source code
BSBinAggregate Source code
BSdtToGRanges Source code
COCOA Man page
aggregateSignal Man page Source code
aggregateSignalGRList Man page Source code
atf3_chr1 Man page
averagePerRegion Source code
brcaATACCoord1 Man page
brcaATACData1 Man page
brcaMCoord1 Man page
brcaMetadata Man page
brcaMethylData1 Man page
brcaPCScores Man page
brcaPCScores657 Man page
buildJ Source code
checkConvertInputClasses Source code
cleanws Source code
convertToFromNullDist Man page Source code
createCorFeatureMat Source code
dtToGr Source code
dtToGrInternal Source code
esr1_chr1 Man page
fitGammaNullDist Source code
gata3_chr1 Man page
getGammaPVal Man page Source code
getMetaRegionProfile Man page Source code
getPermStat Man page Source code
getPermStatSingle Source code
getScoringMethods Source code
getTopRegions Man page
grToDt Source code
lapplyAlias Source code
makeSymmetric Source code
nrf1_chr1 Man page
pGammaList Source code
permListToOneNullDist Source code
plotAnnoScoreDist Man page Source code
regionQuantileByTargetVar Man page Source code
rsRankingIndex Man page
rsScoreHeatmap Man page Source code
rsScores Man page
runCOCOA Man page Source code
runCOCOAPerm Man page Source code
setLapplyAlias Source code
signalAlongAxis Man page Source code
weightedAvePerRegion Source code
COCOA documentation built on Nov. 8, 2020, 5:42 p.m.