brcaATACCoord1: A GRanges object with coordinates for select BRCA ATAC-seq...
In COCOA: Coordinate Covariation Analysis
Description
Corresponds to
the rows of brcaATACData1.
The ATAC-seq data is from breast cancer
patients from The Cancer Genome Atlas
(TCGA-BRCA, Corces et. al, 2018, doi: 10.1126/science.aav1898,
https://atacseq.xenahubs.net/download/brca/brca_peak_Log2Counts_dedup).
Coordinates correspond to the hg38 genome version.
Only select regions on chr1 are included to keep
the example data small.
Usage
1
Format
A GRanges object
COCOA documentation built on Nov. 8, 2020, 5:42 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Corresponds to the rows of brcaATACData1. The ATAC-seq data is from breast cancer patients from The Cancer Genome Atlas (TCGA-BRCA, Corces et. al, 2018, doi: 10.1126/science.aav1898, https://atacseq.xenahubs.net/download/brca/brca_peak_Log2Counts_dedup). Coordinates correspond to the hg38 genome version. Only select regions on chr1 are included to keep the example data small.
Usage
1 |
Format
A GRanges object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.