Files in CRImage
CRImage a package to classify cells and calculate tumour cellularity

DESCRIPTION
NAMESPACE
inst/doc/CRImage.Rnw
inst/doc/CRImage.pdf inst/doc/CRImage.R
inst/extdata/classifier_GU_Da33_0.8
inst/extdata/trainingData.txt
inst/extdata/exImg.jpg
inst/extdata/lImg.jpg
inst/extdata/imgCorrected.jpg
inst/extdata/testClassifier
inst/extdata/exImg2.jpg
inst/extdata/exImg3.jpg
inst/extdata/penClassifier
inst/extdata/referenceHist
inst/extdata/pixelClassifier
inst/extdata/8905/FinalScanModified.ini
inst/extdata/8905/PreviewSlide.jpg
inst/extdata/8905/Da2.jpg
inst/extdata/8905/ScanScope.icc
inst/extdata/8905/Da6.jpg
inst/extdata/8905/SlideMacro.jpg
inst/extdata/8905/SlideScan.ini
inst/extdata/8905/Da1.jpg
inst/extdata/8905/Da5.jpg
inst/extdata/8905/SlideLabel.jpg
inst/extdata/8905/Ss4.jpg
inst/extdata/8905/index.cws
inst/extdata/8905/Da0.jpg
inst/extdata/8905/FinalScan.ini
inst/extdata/8905/SlideThumb.jpg
inst/extdata/8905/Ss1.jpg
inst/extdata/8905/Da7.jpg
inst/extdata/8905/Ss2.jpg
inst/extdata/8905/Da4.jpg
inst/extdata/8905/Da3.jpg
inst/extdata/8905/Da8.jpg
inst/extdata/8905/Ss3.jpg
vignettes/classifiedImage.jpg
vignettes/segmentedImage.pdf
vignettes/cancerHeatmap.jpg
vignettes/CRImage.Rnw
vignettes/segmentedImageRaw.pdf
vignettes/cellularity2.jpg
vignettes/segmentedImage.jpg
vignettes/segmentedImageRaw.jpg
vignettes/cellularity2.pdf
vignettes/imgCorrected.jpg
vignettes/exImg2.jpg
vignettes/exImg3.jpg
vignettes/labeledImage.pdf R/hist3d.R R/oregonThreshold.R R/SauvolaThreshold.R R/localThreshold.R R/kernelSmoother.R R/classificationAperio.R R/segmentCytoplasma.R R/calculateCellularity.R R/createClassifier.R R/classifyCells.R R/parseFinalScan.R R/segmentImage.R R/numberOfNeighbors.R R/imageCompression.R R/classifyPen.R R/findSlices.R R/convertHSVToRGB.R R/searchStructures.R R/plotCorrectedCN.R R/paintCells.R R/plotImage.R R/classifyStructures.R R/segmentStructures.R R/writeDensityImage.R R/correctCopyNumber.R R/convertRGBToLAB.R R/convertLABToRGB.R R/colorCorrection.R R/processAperio.R R/Phansalkar_threshold.R R/convertRGBToHSV.R R/localORThreshold.R R/labelCells.R R/calculateMeanStdTarget.R R/calculateOtsu.R R/getImageDistance.R R/determineCellularity.R R/createBinaryImage.R man/SauvolaThreshold.Rd man/CRImage-internal.Rd man/calculateCellularity.Rd man/convertRGBToHSV.Rd man/plotCorrectedCN.Rd man/correctCopyNumber.Rd man/convertLABToRGB.Rd man/convertHSVToRGB.Rd man/processAperio.Rd man/calculateMeanStdTarget.Rd man/segmentImage.Rd man/convertRGBToLAB.Rd man/createClassifier.Rd man/CRImage-package.Rd man/colorCorrection.Rd man/createBinaryImage.Rd man/labelCells.Rd man/classifyCells.Rd man/calculateOtsu.Rd
build/vignette.rds
CRImage documentation built on May 2, 2018, 4:21 a.m.