README.md

In CancerSubtypes: Cancer subtypes identification, validation and visualization based on multiple genomic data sets

CancerSubtypes: an R/Bioconductor package for molecular cancer subtype identification, validation, and visualization

The R/Bioconductor package CancerSubtypes integrates the current common computational biology methods for cancer subtypes identification and provides a standardized framework for cancer subtype analysis based multi-omics data, such as gene expression, miRNA expression, DNA methylation and others.

Installing CancerSubtypes

{r,eval=FALSE,warning=FALSE,message=FALSE} devtools::install_github("taoshengxu/CancerSubtypes")

Manual

Tutorial and examples can be found here.

Citation

Please cite the following article when using CancerSubtypes:

Xu, T. et al. CancerSubtypes: an R/Bioconductor package for molecular cancer subtype identification, validation, and visualization. Bioinformatics (2017) doi:10.1093/bioinformatics/btx378.

CancerSubtypes documentation built on Nov. 8, 2020, 8:24 p.m.