ChAMP: Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPIC
Version 2.9.9

The package includes quality control metrics, a selection of normalization methods and novel methods to identify differentially methylated regions and to highlight copy number alterations.

Package details

AuthorYuan Tian [cre,aut], Tiffany Morris [ctb], Lee Stirling [ctb], Andrew Feber [ctb], Andrew Teschendorff [ctb], Ankur Chakravarthy [ctb]
Bioconductor views CopyNumber DNAMethylation MethylationArray Microarray Normalization TwoChannel
MaintainerYuan Tian <[email protected]>
LicenseGPL-3
Version2.9.9
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("ChAMP")

Try the ChAMP package in your browser

Any scripts or data that you put into this service are public.

ChAMP documentation built on Nov. 17, 2017, 10:55 a.m.