ChAMP: Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPIC
Version 2.8.9

The package includes quality control metrics, a selection of normalization methods and novel methods to identify differentially methylated regions and to highlight copy number alterations.

Package details

AuthorYuan Tian [cre,aut], Tiffany Morris [ctb], Lee Stirling [ctb], Andrew Feber [ctb], Andrew Teschendorff [ctb], Ankur Chakravarthy [ctb]
Bioconductor views CopyNumber DNAMethylation MethylationArray Microarray Normalization TwoChannel
MaintainerYuan Tian <champ450k@gmail.com>
LicenseGPL-3
Version2.8.9
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("ChAMP")

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ChAMP documentation built on Aug. 10, 2017, 2:01 a.m.