Description Usage Arguments Details Value
The results of segmenting data from copy number array experiments from programs such as circular binary segmentation (CBS).
1 2 |
x |
an object of class |
showSegRows |
option to show row numbers for the segment start and end. default is FALSE. |
... |
arguments to be passed onto print command called within. |
An object of class DNAcopy
. There is a print
method
that prints the results in a tabular format. Each row gives the
sample, the chromosome, the start and end map locations, the number of
markers and the mean of each segment.
data |
The original CNA object which was the input for segment |
ID |
sample identifier. |
chrom |
the chromosome within the sample. |
loc.start |
the starting map location of the segment |
loc.end |
the ending map location of the segment |
num.mark |
the number of markers in the segment |
data.type |
the segment mean. |
call |
the call that produced the object. |
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