EBSEA: Exon Based Strategy for Expression Analysis of genes
Version 1.4.0

Calculates differential expression of genes based on exon counts of genes obtained from RNA-seq sequencing data.

AuthorArfa Mehmood, Asta Laiho, Laura L. Elo
Bioconductor views DifferentialExpression GeneExpression Sequencing Software
Date of publicationNone
MaintainerArfa Mehmood <arfa.mehmood@utu.fi>
LicenseGPL-2
Version1.4.0
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("EBSEA")

Popular man pages

EBSEA: Exon Based Startegy for Expression Analysis of genes
filterCounts: Filter Count Data
filterGenes: Filter Gene List
origCounts: Subset of Pasilla Dataset
visualizeGenes: Visualize Gene
See all...

All man pages Function index File listing

Man pages

EBSEA: Exon Based Startegy for Expression Analysis of genes
filterCounts: Filter Count Data
filterGenes: Filter Gene List
origCounts: Subset of Pasilla Dataset
visualizeGenes: Visualize Gene

Functions

Files

DESCRIPTION
NAMESPACE
R
R/EBSEA.R
R/filterCounts.R
R/filterGenes.R
R/findScore.R
R/generateNullDistribution.R
R/normalizeData.R
R/visualizeGenes.R
build
build/vignette.rds
data
data/origCounts.rda
inst
inst/doc
inst/doc/EBSEA.R
inst/doc/EBSEA.Rnw
inst/doc/EBSEA.pdf
man
man/EBSEA.Rd
man/filterCounts.Rd
man/filterGenes.Rd
man/origCounts.Rd
man/visualizeGenes.Rd
vignettes
vignettes/EBSEA.Rnw
EBSEA documentation built on May 20, 2017, 10:13 p.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.