Man pages for EDASeq
Exploratory Data Analysis and Normalization for RNA-Seq
| barplot-methods | Methods for Function 'barplot' in Package 'EDASeq' |
| betweenLaneNormalization-methods | Methods for Function 'betweenLaneNormalization' in Package... |
| biasBoxplot-methods | Methods for Function 'biasBoxplot' in Package 'EDASeq' |
| biasPlot-methods | Methods for Function 'biasPlot' in Package 'EDASeq' |
| boxplot-methods | Methods for Function 'boxplot' in Package 'EDASeq' |
| EDASeq-package | Exploratory Data Analysis and Normalization for RNA-Seq data |
| getGeneLengthAndGCContent | Get gene length and GC-content |
| MDPlot-methods | Methods for Function 'MDPlot' in Package 'EDASeq' |
| meanVarPlot-methods | Methods for Function 'meanVarPlot' in Package 'EDASeq' |
| newSeqExpressionSet | Function to create a new 'SeqExpressionSet' object. |
| plot-methods | Methods for Function 'plot' in Package 'EDASeq' |
| plotNtFrequency-methods | Methods for Function 'plotNtFrequency' in Package 'EDASeq' |
| plotPCA-methods | Methods for Function 'plotPCA' in Package 'EDASeq' |
| plotQuality-methods | Methods for Function 'plotQuality' in Package 'EDASeq' |
| plotRLE-methods | Methods for Function 'plotRLE' in Package 'EDASeq' |
| SeqExpressionSet-class | "SeqExpressionSet" class for collections of short reads |
| withinLaneNormalization-methods | Methods for Function 'withinLaneNormalization' in Package... |
| yeastGC | GC-content of _S. Cerevisiae_ genes |
| yeastLength | Length of _S. Cerevisiae_ genes |
