High-level function to produce plots given one
BamFileList object and one
signature(x = "BamFileList", y = "FastqFileList")
It produce a barplot of the percentage of mapped reads. If
strata=TRUE it stratifies the bars according to the unique/non-unique mapped reads.
To be meaningful,
x should be a set of aligned reads and
y a set of raw reads on the same samples.
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