ebmTestData: Data used in tests and examples.
In EmpiricalBrownsMethod: Uses Brown's method to combine p-values from dependent tests
Description
Usage
Format
Value
Source
Description
This data is used in the unit tests and usage examples. There are four items:
allPvals, dat, pathways, and randData. allPvals is a data.frame of p-values
for the spearman correlation between CHD4 and each of the 45 genes.
dat is the gene expression data corresponding to genes in allPvals.
pathways is a data.frame listing gene membership for 3 biochemical pathways.
randData is a gaussian generated data set,
emphasizing dependence among variables. Independent Var [line 1] are 25
samples from a unit normal distribution. Depedent Var 1-10 [line 2-11] are
each 25 samples drawn from a 10 dimensional normal distribution centered at
the origin with off diagonal terms a=0.25. The P values from a pearson
correlation between the independent var and each dependent var are combined.
Usage
1
Format
Rdata object
Value
data objects in the environment
Source
GEO and generated.
EmpiricalBrownsMethod documentation built on Nov. 8, 2020, 8:16 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Value Source
Description
This data is used in the unit tests and usage examples. There are four items:
allPvals, dat, pathways, and randData. allPvals is a data.frame of p-values for the spearman correlation between CHD4 and each of the 45 genes.
dat is the gene expression data corresponding to genes in allPvals.
pathways is a data.frame listing gene membership for 3 biochemical pathways.
randData is a gaussian generated data set, emphasizing dependence among variables. Independent Var [line 1] are 25 samples from a unit normal distribution. Depedent Var 1-10 [line 2-11] are each 25 samples drawn from a 10 dimensional normal distribution centered at the origin with off diagonal terms a=0.25. The P values from a pearson correlation between the independent var and each dependent var are combined.
Usage
1 |
Format
Rdata object
Value
data objects in the environment
Source
GEO and generated.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.