Predicting Disease Progression Based on Methylation Correlated Blocks using Ensemble Models

create_demo | create demo matrix |

demo_data | Expression matrix of demo dataset. |

demo_MCBinformation | MCB information. |

demo_survival_data | Survival data of demo dataset. |

draw_survival_curve | draw survival curve |

ensemble_model | Trainging stacking ensemble model for Methylation Correlation... |

ensemble_prediction | fitting function using stacking ensemble model for... |

fast_roc_calculation | Fast calculation of AUC for ROC using parallel strategy |

IdentifyMCB | Identification of methylation correlated blocks |

metricMCB | Calculation of the metric matrix for Methylation Correlation... |

metricMCB.cv | Calculation of model AUC for Methylation Correlation Blocks... |

pre_process_methylation | Preprocess the Beta value matrix |

univ_coxph | Batch test for variables using coxph |

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