Home

/

ExploreModelMatrix: Graphical Exploration of Design Matrices

Given a sample data table and a design formula, ExploreModelMatrix generates an interactive application for exploration of the resulting design matrix. This can be helpful for interpreting model coefficients and constructing appropriate contrasts in (generalized) linear models. Static visualizations can also be generated.

README.md Deploying ExploreModelMatrix on a Shiny Server Interactive exploration of design matrices with ExploreModelMatrix

Vignettes Man pages API and functions Files

Package details
Author	Charlotte Soneson [aut, cre] (<https://orcid.org/0000-0003-3833-2169>), Federico Marini [aut] (<https://orcid.org/0000-0003-3252-7758>), Michael Love [aut] (<https://orcid.org/0000-0001-8401-0545>), Florian Geier [aut] (<https://orcid.org/0000-0002-9076-9264>), Michael Stadler [aut] (<https://orcid.org/0000-0002-2269-4934>)
Bioconductor views	DifferentialExpression ExperimentalDesign Regression
Maintainer	Charlotte Soneson <charlottesoneson@gmail.com>
License	MIT + file LICENSE
Version	1.2.0
URL	https://github.com/csoneson/ExploreModelMatrix
Package repository	View on Bioconductor
Installation	Install the latest version of this package by entering the following in R: `if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("ExploreModelMatrix")`