ExploreModelMatrix: Graphical Exploration of Design Matrices

Given a sample data table and a design formula, ExploreModelMatrix generates an interactive application for exploration of the resulting design matrix. This can be helpful for interpreting model coefficients and constructing appropriate contrasts in (generalized) linear models. Static visualizations can also be generated.

Package details

AuthorCharlotte Soneson [aut, cre] (<https://orcid.org/0000-0003-3833-2169>), Federico Marini [aut] (<https://orcid.org/0000-0003-3252-7758>), Michael Love [aut] (<https://orcid.org/0000-0001-8401-0545>), Florian Geier [aut] (<https://orcid.org/0000-0002-9076-9264>), Michael Stadler [aut] (<https://orcid.org/0000-0002-2269-4934>)
Bioconductor views DifferentialExpression ExperimentalDesign Regression
MaintainerCharlotte Soneson <charlottesoneson@gmail.com>
LicenseMIT + file LICENSE
URL https://github.com/csoneson/ExploreModelMatrix
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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ExploreModelMatrix documentation built on Nov. 8, 2020, 6:49 p.m.