This internally called function calculates the background correction for each probe based on the median intensity of all background probes with the same GC-content of as the target probe in question
mismatch(probes, bgp, intensity)
probe indicies for target probes. Each probe index contains the gc-content of the probe
contains probe location (indicies), GC-content, and annotations of the background probes of a given chip type. For WT-type arrays, the
The intensities value of the
This internally called function calculates the probe background correction based on the median intensity of all background probes with the same gc-content of as the target probe in question
mismatch returns a numeric vector containing the gc-content based background correction for every probe included in the analysis
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