API for GGBase
GGBase infrastructure for genetics of gene expression package GGtools
| Global functions | |
|---|---|
| .clipPCs.SE | Source code |
| .onAttach | Source code |
| .permEx | Source code |
| GTFfilter | Man page |
| GTFfilter.legacy | Source code |
| MAFfilter | Man page |
| MAFfilter.legacy | Source code |
| [,smlSet,ANY,ANY,ANY-method | Man page |
| allsnps | Man page |
| casting | Man page |
| clipPCs | Man page |
| clipPCs,RangedSummarizedExperiment,numeric,logical-method | Man page |
| clipPCs,RangedSummarizedExperiment,numeric,missing-method | Man page |
| clipPCs,SummarizedExperiment,numeric,logical-method | Man page |
| clipPCs,SummarizedExperiment,numeric,missing-method | Man page |
| clipPCs,smlSet,numeric,logical-method | Man page |
| clipPCs,smlSet,numeric,missing-method | Man page |
| combine,smlSet,smlSet-method | Man page |
| dropDupSNPs | Source code |
| dropMonomorphies | Man page Source code |
| exprs,smlSet-method | Man page |
| externalize | Man page Source code |
| genesym | Man page |
| genesym,character-method | Man page |
| genesym-class | Man page |
| getSS | Man page Source code |
| make_smlSet | Man page |
| make_smlSet.legacy | Source code |
| nsFilter,smlSet-method | Man page |
| permEx | Man page |
| permEx,smlSet-method | Man page |
| plot_EvG | Man page |
| plot_EvG,genesym,rsid,smlSet-method | Man page |
| plot_EvG,probeId,rsid,smlSet-method | Man page |
| probeId | Man page |
| probeId,character-method | Man page |
| probeId-class | Man page |
| reconstruct | Source code |
| regressOut | Man page Source code |
| rsid | Man page |
| rsid,character-method | Man page |
| rsid,numeric-method | Man page |
| rsid-class | Man page |
| smList | Man page |
| smList,smlSet-method | Man page |
| smlSet-class | Man page |
| smlSummary | Source code |
| sym2pid | Source code |
| valsml | Source code |
