| clipPCs | transformations of expression data in smlSet instances |
| externalize | create a package with a decomposed smlSet instance from a... |
| MAFfilter | Filter genotype contents of an smlSet according to certain... |
| make_smlSet | construct an smlSet instance from existing resources |
| plot_EvG | display the association between expression values and... |
| rsid-class | Class '"rsid"' |
| smlSet-class | Class '"smlSet"' |
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