cptPlot: Scatterplot representation of gene sets by change points

In GISPA: GISPA: Method for Gene Integrated Set Profile Analysis

Description

Scatterplot representation of identified change points on the estimated profile statistics within the data

Usage

cptPlot(psv, cut.pts)

Arguments

psv	: A data vector of estimated profile statistics on which changepoints are identified
cut.pts	: The estimated profile statistics cutoffs corrosponding to the locations in psv

Details

This function expects 'gispa.output' profile statistics output from GISPA.R main function

Value

Plot representing all the identified gene sets by change points in the data

Author(s)

Bhakti Dwivedi & Jeanne Kowalski

Examples

x <- runif(100, 0.0, 1.0)
y <- c(0.2, 0.6, 0.8)
cpt.plot <- cptPlot(psv=x,cut.pts=y)

GISPA documentation built on Nov. 8, 2020, 8:11 p.m.