The semantic comparisons of Gene Ontology (GO) annotations provide quantitative ways to compute similarities between genes and gene groups, and have became important basis for many bioinformatics analysis approaches. GOSemSim is an R package for semantic similarity computation among GO terms, sets of GO terms, gene products and gene clusters. GOSemSim implemented five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively.
|Author||Guangchuang Yu [aut, cre], Alexey Stukalov [ctb], Chuanle Xiao [ctb]|
|Bioconductor views||Annotation Clustering GO Network Pathways Software|
|Maintainer||Guangchuang Yu <[email protected]>|
|Package repository||View on Bioconductor|
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