Biocview "GO"

AmiGO visualize R interface
AmiGO visualize R interface
Annotation and gene expression data retrieval from Bgee database
Annotation and gene expression data retrieval from Bgee database
Annotation and gene expression data retrieval from Bgee database
Annotation for microarrays
Annotation for microarrays
Annotation for microarrays
Annotation tools for Affymetrix biological metadata
Annotation tools for Affymetrix biological metadata
An R interface to the Ontology Lookup Service
An R interface to the Ontology Lookup Service
An R interface to the Ontology Lookup Service
An R Package for Unbiased Splicing Pathway Analysis
An R package to perform the network enrichment analysis (NEA).
An R pipeline for .bed file annotation, comparing GO term enrichment between gene sets and data visualisation
An R pipeline for .bed file annotation, comparing GO term enrichment between gene sets and data visualisation
An R pipeline for .bed file annotation, comparing GO term enrichment between gene sets and data visualisation
An R pipeline for .bed file annotation, comparing GO term enrichment between gene sets and data visualisation
A tool to use GO Subtrees to Tag and Annotate Genes within a set
A tool to use GO Subtrees to Tag and Annotate Genes within a set
A tool to use GO Subtrees to Tag and Annotate Genes within a set
Augmented functionality for analysis of epigenomic variance
Base package for enabling powerful shiny web displays of Bioconductor objects
Base package for enabling powerful shiny web displays of Bioconductor objects
Better prediction by use of co-data: Adaptive group-regularized ridge regression
Better prediction by use of co-data: Adaptive group-regularized ridge regression
Better prediction by use of co-data: Adaptive group-regularized ridge regression
Category Analysis
Category Analysis
Category Analysis
Client for GREAT Analysis
Client for GREAT Analysis
Client for GREAT Analysis
Client for GREAT Analysis
co-expressed gene-set enrichment analysis
co-expressed gene-set enrichment analysis
co-expressed gene-set enrichment analysis
Comparison between multiple levels of gene expression
Comparison between multiple levels of gene expression
Computation of functional similarities between GO terms and gene products; GO enrichment analysis
Computation of functional similarities between GO terms and gene products; GO enrichment analysis
Convenience package for solving some liftover challenges
Convenience package for solving some liftover challenges
Efficient compression and analysis of Hi-C Data
Ensemble of Gene Set Enrichment Analyses
Ensemble of Gene Set Enrichment Analyses
Find the most characteristic gene ontology terms for groups of human genes
Find the most characteristic gene ontology terms for groups of human genes
Find the most characteristic gene ontology terms for groups of human genes
Find the most characteristic gene ontology terms for groups of human genes
Functional Gene Networks derived from biological enrichment analyses
Functional Gene Networks derived from biological enrichment analyses
Functions for Gene Ontology database
Functions for Gene Ontology database
Gene Ontology analyser for RNA-seq and other length biased data
Gene Ontology analyser for RNA-seq and other length biased data
Gene Ontology analyser for RNA-seq and other length biased data
Gene Ontology analyser for RNA-seq and other length biased data
Generally Applicable Gene-set Enrichment for Pathway Analysis
Generally Applicable Gene-set Enrichment for Pathway Analysis
Generating Various Molecular Representations for Chemicals, Proteins, DNAs/RNAs and Their Interactions
Generating Various Molecular Representations for Chemicals, Proteins, DNAs/RNAs and Their Interactions
Generating Various Molecular Representations for Chemicals, Proteins, DNAs/RNAs and Their Interactions
Gene Set Enrichment Analysis Extended to Contingency Cubes
Gene Set Enrichment Analysis Extended to Contingency Cubes
Gene set enrichment data structures and methods
Gene set enrichment data structures and methods
Gene set enrichment data structures and methods
GO-function: deriving biologcially relevant functions from statistically significant functions
GO-function: deriving biologcially relevant functions from statistically significant functions
goProfiles: an R package for the statistical analysis of functional profiles
goProfiles: an R package for the statistical analysis of functional profiles
GO-terms Semantic Similarity Measures
GO-terms Semantic Similarity Measures
GO-terms Semantic Similarity Measures
Identifying differential DNA loops from chromatin topology data
Identifying differential DNA loops from chromatin topology data
Identifying differential DNA loops from chromatin topology data
Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure
Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure
Information Accretion-based Function Predictor Evaluation
Information Accretion-based Function Predictor Evaluation
Interpretation and Enrichment for Metabolomics Data
Judging Quality of Clustering Methods using Mutual Information
Judging Quality of Clustering Methods using Mutual Information
Meta-analysis of high-throughput experiments using feature annotations
Meta-analysis of high-throughput experiments using feature annotations
Meta-analysis of high-throughput experiments using feature annotations
Meta-analysis of high-throughput experiments using feature annotations
Model-based gene set analysis
Model-based gene set analysis
Model-based gene set analysis
Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery
Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery
Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery
Multi Dimensional Gene Set Analysis.
Multi Dimensional Gene Set Analysis.
Multi Dimensional Gene Set Analysis.
Multivariate and directional gene set testing
Multivariate and directional gene set testing
Murine Palate miRNA Expression Analysis
Murine Palate miRNA Expression Analysis
Optimized Functional Annotation Of ChIP-seq Data
Optimized Functional Annotation Of ChIP-seq Data
Optimized Functional Annotation Of ChIP-seq Data
Package for enabling powerful shiny web displays of Bioconductor objects
Package for enabling powerful shiny web displays of Bioconductor objects
pcaGoPromoter is used to analyze DNA micro array data
pcaGoPromoter is used to analyze DNA micro array data
RDF processing of ontologies of anatomy, cell lines, and so on
R Interface to UniProt Web Services
R Interface to UniProt Web Services
R Interface to UniProt Web Services
R Interface with InterMine-Powered Databases
R Interface with InterMine-Powered Databases
R Interface with InterMine-Powered Databases
RNA Centric Annotation System
RNA Centric Annotation System
RNA Centric Annotation System
R wrapper for the OMA REST API
SEPA
SEPA
SEPA
Simplified RNA-Seq Analysis Pipeline
Simplified RNA-Seq Analysis Pipeline
statistical analysis and visualization of functional profiles for genes and gene clusters
statistical analysis and visualization of functional profiles for genes and gene clusters
statistical analysis and visualization of functional profiles for genes and gene clusters
statistical analysis and visualization of functional profiles for genes and gene clusters
Statistical analysis of high-throughput RNAi screens
Statistical analysis of high-throughput RNAi screens
Testing Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set Testing
Testing Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set Testing
Tools for making reports in various formats
Tools for making reports in various formats
Tools for making reports in various formats
Tools for manipulating GO and microarrays
Tools for manipulating GO and microarrays
Tools for manipulating GO and microarrays.
Visualise microarray and RNAseq data using gene ontology annotations
Visualise microarray and RNAseq data using gene ontology annotations
Visualise microarray and RNAseq data using gene ontology annotations
Visualise microarray and RNAseq data using gene ontology annotations
Visualise microarray and RNAseq data using gene ontology annotations
Visualize biclusters identified in gene expression data
Visualize biclusters identified in gene expression data
Word cloud summaries of GO enrichment analysis
Word cloud summaries of GO enrichment analysis
Word cloud summaries of GO enrichment analysis
Yet Another Gene Ontology Package
You Only Lookup One (small part of an otherwise large matrix)