MmPalateMiRNA: Murine Palate miRNA Expression Analysis

R package compendium for the analysis of murine palate miRNA two-color expression data.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("MmPalateMiRNA")
AuthorGuy Brock <guy.brock@louisville.edu>, Partha Mukhopadhyay <p0mukh01@louisville.edu>, Vasyl Pihur <vasyl.pihur@louisville.edu>, Robert M. Greene <Dr.Bob.Greene@gmail.com>, and M. Michele Pisano <mmpisa01@louisville.edu>
Bioconductor views Clustering DifferentialExpression GO Microarray MultipleComparison Pathways Preprocessing QualityControl ReportWriting SequenceMatching TwoChannel
Date of publicationNone
MaintainerGuy Brock <guy.brock@louisville.edu>
LicenseGPL-3
Version1.26.0

View on Bioconductor

Functions

checkMVs Man page
checkMVs-methods Man page
checkMVs,RGList-method Man page
checkOutliers Man page
checkOutliers-methods Man page
checkOutliers,RGList-method Man page
clustPlot Man page
densityplot Man page
densityplot,list,missing-method Man page
densityplot-methods Man page
densityplot,RGList,missing-method Man page
filterArray Man page
filterArray-methods Man page
filterArray,RGList-method Man page
fixMVs Man page
fixOutliers Man page
imputeKNN Man page
levelplot Man page
levelplot,list,missing-method Man page
levelplot-methods Man page
levelplot,RGList,missing-method Man page
MADvsMedianPlot Man page
MADvsMedianPlot,list-method Man page
MADvsMedianPlot-methods Man page
MAplot Man page
MAplot,MAList-method Man page
MAplot-methods Man page
MAplot,NChannelSet-method Man page
MmPalateMiRNA Man page
MmPalateMiRNA-package Man page
PalateData Man page

Files

DESCRIPTION
NAMESPACE
R
R/MmPalateMiRNA-Methods.R R/MmPalateMiRNA-functions.R
build
build/vignette.rds
data
data/PalateData.rda
inst
inst/doc
inst/doc/MmPalateMiRNA.R
inst/doc/MmPalateMiRNA.Rnw
inst/doc/MmPalateMiRNA.pdf
man
man/MADvsMedianPlot.Rd man/MAplot.Rd man/MmPalateMiRNA-package.Rd man/PalateData.Rd man/checkMVs.Rd man/checkOutliers.Rd man/clustPlot.Rd man/densityplot.Rd man/filterArray.Rd man/fixMVs.Rd man/fixOutliers.Rd man/imputeKNN.Rd man/levelplot.Rd
vignettes
vignettes/MmPalateMiRNA.Rnw
vignettes/auto
vignettes/auto/MmPalateMiRNA.el
vignettes/auto/PalateMiRNAComp.el
vignettes/auto/gbMacros.el
vignettes/gbMacros.sty
vignettes/miRNA_Refs.bib

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.