The GO-function package provides a tool to address the redundancy that result from the GO structure or multiple annotation genes and derive biologically relevant functions from the statistically significant functions based on some intuitive assumption and statistical testing.
|Author||Jing Wang <firstname.lastname@example.org>|
|Bioconductor views||GO GeneSetEnrichment Microarray Pathways|
|Date of publication||None|
|Maintainer||Jing Wang <email@example.com>|
|License||GPL (>= 2)|
createGODAG: Creation of GO DAG stucture for statistically significant GO...
enrichmentFunction: Identification of statistically significant GO terms
globalRedundancy: Treating for glocal redundancy between GO terms which share...
GOFunction: main function of the GO-function package
GOFunction-package: GO-function: deriving biologically relevant functions from...
interestGenes: Colon cancer differentially expressed genes
localRedundancy: Treating for local redundancy between GO terms with...
refGenes: Colon cancer background genes
showSigNodes: Drawing the GO DAG structure of statistically significant...
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