GOpro: Find the most characteristic gene ontology terms for groups of human genes

Find the most characteristic gene ontology terms for groups of human genes. This package was created as a part of the thesis which was developed under the auspices of MI^2 Group (http://mi2.mini.pw.edu.pl/, https://github.com/geneticsMiNIng).

Author
Lidia Chrabaszcz
Date of publication
None
Maintainer
Lidia Chrabaszcz <chrabaszcz.lidia@gmail.com>
License
GPL-3
Version
1.0.0
URLs

View on Bioconductor

Man pages

exrtcga
Expressions of human genes.
findGO
Find top Gene Ontology terms for given genes.
GOpro
GOpro: find the most characteristic gene ontology terms for...

Files in this package

GOpro/DESCRIPTION
GOpro/NAMESPACE
GOpro/NEWS
GOpro/R
GOpro/R/GO.R
GOpro/R/GOpro.R
GOpro/R/RcppExports.R
GOpro/R/aovTopTest.R
GOpro/R/clustering.R
GOpro/R/data.R
GOpro/R/extendGO.R
GOpro/R/findAllGOs.R
GOpro/R/findGO.R
GOpro/R/findTopGOs.R
GOpro/R/groupByProfiles.R
GOpro/R/groupByTukey.R
GOpro/R/ontologyOver.R
GOpro/R/plotgenecluster.R
GOpro/R/printgenecluster.R
GOpro/R/tukeyHSDTest.R
GOpro/R/unbundleCluster.R
GOpro/R/unload.R
GOpro/build
GOpro/build/vignette.rds
GOpro/data
GOpro/data/exrtcga.RData
GOpro/inst
GOpro/inst/doc
GOpro/inst/doc/GOpro_vignette.R
GOpro/inst/doc/GOpro_vignette.Rmd
GOpro/inst/doc/GOpro_vignette.html
GOpro/man
GOpro/man/GOpro.Rd
GOpro/man/exrtcga.Rd
GOpro/man/findGO.Rd
GOpro/src
GOpro/src/GOpro_init.c
GOpro/src/RcppExports.cpp
GOpro/src/fisher.cpp
GOpro/tests
GOpro/tests/testthat
GOpro/tests/testthat.R
GOpro/tests/testthat/test-GOpro.R
GOpro/vignettes
GOpro/vignettes/GOpro_vignette.Rmd