BgeeDB: Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology

A package for the annotation and gene expression data download from Bgee database, and TopAnat analysis: GO-like enrichment of anatomical terms, mapped to genes by expression patterns.

Package details

AuthorAndrea Komljenovic [aut, cre], Julien Roux [aut, cre]
Bioconductor views DataImport GO GeneExpression GeneSetEnrichment Microarray Sequencing Software
MaintainerJulien Wollbrett <>, Julien Roux <>, Andrea Komljenovic <>, Frederic Bastian <>
LicenseGPL-3 + file LICENSE
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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BgeeDB documentation built on Nov. 8, 2020, 8:21 p.m.