This package supports functional characteristics of both coding and non-coding genomics data for thousands of species with up-to-date gene annotation. It provides a univeral interface for gene functional annotation from a variety of sources and thus can be applied in diverse scenarios. It provides a tidy interface to access, manipulate, and visualize enrichment results to help users achieve efficient data interpretation. Datasets obtained from multiple treatments and time points can be analyzed and compared in a single run, easily revealing functional consensus and differences among distinct conditions.
|Bioconductor views||Annotation Clustering GO GeneSetEnrichment KEGG MultipleComparison Pathways Reactome Visualization|
|Maintainer||Guangchuang Yu <firstname.lastname@example.org>|
|URL||https://yulab-smu.top/biomedical-knowledge-mining-book/ (docs) https://doi.org/10.1016/j.xinn.2021.100141 (paper)|
|Package repository||View on GitHub|
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