GuangchuangYu/clusterProfiler: A universal enrichment tool for interpreting omics data
This package supports functional characteristics of both coding and non-coding genomics data for thousands of species with up-to-date gene annotation. It provides a univeral interface for gene functional annotation from a variety of sources and thus can be applied in diverse scenarios. It provides a tidy interface to access, manipulate, and visualize enrichment results to help users achieve efficient data interpretation. Datasets obtained from multiple treatments and time points can be analyzed and compared in a single run, easily revealing functional consensus and differences among distinct conditions.
Getting started
Browse package contents
Package details |
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| Bioconductor views | Annotation Clustering GO GeneSetEnrichment KEGG MultipleComparison Pathways Reactome Visualization |
| Maintainer | Guangchuang Yu <guangchuangyu@gmail.com> |
| License | Artistic-2.0 |
| Version | 4.11.1 |
| URL | https://yulab-smu.top/biomedical-knowledge-mining-book/ (docs) https://doi.org/10.1016/j.xinn.2021.100141 (paper) |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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