enrichPC: enrichPC

In GuangchuangYu/clusterProfiler: A universal enrichment tool for interpreting omics data

enrichPC

Description

ORA analysis for Pathway Commons

Usage

enrichPC(gene, source, keyType = "hgnc", ...)

Arguments

gene	a vector of genes (either hgnc symbols or uniprot IDs)
source	Data source of Pathway Commons, e.g., 'reactome', 'kegg', 'pathbank', 'netpath', 'panther', etc.
keyType	specify the type of input 'gene' (one of 'hgnc' or 'uniprot')
...	additional parameters, see also the parameters supported by the enricher() function

Details

This function performs over-representation analysis using Pathway Commons

Value

A enrichResult instance

GuangchuangYu/clusterProfiler documentation built on April 12, 2024, 5:19 a.m.