interactiveDisplay: Package for enabling powerful shiny web displays of Bioconductor objects

The interactiveDisplay package contains the methods needed to generate interactive Shiny based display methods for Bioconductor objects.

Author
Shawn Balcome, Marc Carlson
Date of publication
None
Maintainer
Shawn Balcome <balc0022@umn.edu>
License
Artistic-2.0
Version
1.12.0

View on Bioconductor

Man pages

altgr
altgr: Open a Shiny Application for ...
bicgo
bicgo: Open a Shiny Application for manual/interactive...
expr
An Example ExpressionSet object
gridsvgjs
gridsvgjs: Open a Shiny Application for a Grid Plot
gridtweak
gridtweak: Open a Shiny Application for the purpose of...
interactiveDisplay-methods
display: Open a Shiny application for a Bioconductor object
mmgr
An Example GRanges Object
mmgrl
An Example GRangesList Object
se
An Example RangedSummarizedExperiment Object
simplenet
simplenet: Open a Shiny Application for ...

Files in this package

interactiveDisplay/DESCRIPTION
interactiveDisplay/NAMESPACE
interactiveDisplay/R
interactiveDisplay/R/ExpressionSet.R
interactiveDisplay/R/GRanges.R
interactiveDisplay/R/GRangesList.R
interactiveDisplay/R/MRexperiment.R
interactiveDisplay/R/SummarizedExperiment.R
interactiveDisplay/R/altgr.R
interactiveDisplay/R/bicgo.R
interactiveDisplay/R/gridsvgjs.R
interactiveDisplay/R/gridtweak.R
interactiveDisplay/R/interactiveDisplay.R
interactiveDisplay/R/simplenet.R
interactiveDisplay/R/zzz.R
interactiveDisplay/build
interactiveDisplay/build/vignette.rds
interactiveDisplay/data
interactiveDisplay/data/expr.rda
interactiveDisplay/data/mmgr.rda
interactiveDisplay/data/mmgrl.rda
interactiveDisplay/data/se.rda
interactiveDisplay/inst
interactiveDisplay/inst/doc
interactiveDisplay/inst/doc/interactiveDisplay.R
interactiveDisplay/inst/doc/interactiveDisplay.Rnw
interactiveDisplay/inst/doc/interactiveDisplay.pdf
interactiveDisplay/inst/www
interactiveDisplay/inst/www/css
interactiveDisplay/inst/www/css/interactiveDisplay.css
interactiveDisplay/inst/www/js
interactiveDisplay/inst/www/js/d3.v2.js
interactiveDisplay/inst/www/js/demo.js
interactiveDisplay/inst/www/js/editable.min.js
interactiveDisplay/inst/www/js/graph.js
interactiveDisplay/inst/www/js/jquery-svgpan.js
interactiveDisplay/inst/www/js/jquery.dataTables.min.js
interactiveDisplay/inst/www/js/jquery.dataTables.nightly.js
interactiveDisplay/inst/www/js/jquery.js
interactiveDisplay/inst/www/js/jquery.min.js
interactiveDisplay/inst/www/js/jscolor
interactiveDisplay/inst/www/js/jscolor/arrow.gif
interactiveDisplay/inst/www/js/jscolor/cross.gif
interactiveDisplay/inst/www/js/jscolor/hs.png
interactiveDisplay/inst/www/js/jscolor/hv.png
interactiveDisplay/inst/www/js/jscolor/jscolor.js
interactiveDisplay/inst/www/js/shiny2.js
interactiveDisplay/man
interactiveDisplay/man/altgr.Rd
interactiveDisplay/man/bicgo.Rd
interactiveDisplay/man/expr.Rd
interactiveDisplay/man/gridsvgjs.Rd
interactiveDisplay/man/gridtweak.Rd
interactiveDisplay/man/interactiveDisplay-methods.Rd
interactiveDisplay/man/mmgr.Rd
interactiveDisplay/man/mmgrl.Rd
interactiveDisplay/man/se.Rd
interactiveDisplay/man/simplenet.Rd
interactiveDisplay/vignettes
interactiveDisplay/vignettes/Bioconductor.sty
interactiveDisplay/vignettes/images
interactiveDisplay/vignettes/images/All_Ranges_in_Object.png
interactiveDisplay/vignettes/images/Binned_Mean_Counts_by_Position.png
interactiveDisplay/vignettes/images/Chosen_Probe_for_GO_Summary.png
interactiveDisplay/vignettes/images/Dataframe_Table.png
interactiveDisplay/vignettes/images/Dendrogram_Probes.png
interactiveDisplay/vignettes/images/Dendrogram_Samples.png
interactiveDisplay/vignettes/images/Deposit_Ranges_in_View_Clear_Deposit_Save_to_Console.png
interactiveDisplay/vignettes/images/Deposited_Selections.png
interactiveDisplay/vignettes/images/Dynamically_Created_Metadata_Tabs.png
interactiveDisplay/vignettes/images/Experiment_Info.png
interactiveDisplay/vignettes/images/Force_Layout_Charge_Force_Layout_Link_Distance.png
interactiveDisplay/vignettes/images/GRange_Chromosome.png
interactiveDisplay/vignettes/images/Group_Wide_GO_Summary_Group_Wide_Summary_Min_probe_pop_for_G.png
interactiveDisplay/vignettes/images/Heat_Plot.png
interactiveDisplay/vignettes/images/Heatmap_Color_Scale_Rainbow_Three_Color.png
interactiveDisplay/vignettes/images/Individual_Probe_GO_Summary.png
interactiveDisplay/vignettes/images/Interactive_Plot.png
interactiveDisplay/vignettes/images/Network_Dendrogram_View_Sample_or_Probe.png
interactiveDisplay/vignettes/images/Network_View_Probes.png
interactiveDisplay/vignettes/images/Network_View_Samples.png
interactiveDisplay/vignettes/images/Number_of_Clusters_Hierarchical_Clustering_Method_Distance_S.png
interactiveDisplay/vignettes/images/Number_of_Edges_Distance_Threshold.png
interactiveDisplay/vignettes/images/Plot_Window_Range_Length_Filter_Choose_a_Strand.png
interactiveDisplay/vignettes/images/Probe_Cluster_GO_Summary.png
interactiveDisplay/vignettes/images/Selected_Ranges_in_Current_View.png
interactiveDisplay/vignettes/images/Show_Top_or_Bottom_Ranked_Based_On_Number_of_Probes_to_Displ.png
interactiveDisplay/vignettes/images/Static_Circle_Layout.png
interactiveDisplay/vignettes/images/Stop_Application.png
interactiveDisplay/vignettes/images/Suppress_Heatmap_Transpose_Heatmap.png
interactiveDisplay/vignettes/images/Tweak_Axis_Label_Font_Size.png
interactiveDisplay/vignettes/images/UCSC_Genome_Suppress_Ideogram.png
interactiveDisplay/vignettes/images/gridSVG.png
interactiveDisplay/vignettes/images/simplenet.png
interactiveDisplay/vignettes/images/summarizedExperimentUI.png
interactiveDisplay/vignettes/interactiveDisplay.Rnw
interactiveDisplay/vignettes/interactiveDisplay.bib