Biocview "AnnotationData"

A data package for ontoProc

Alternative splicing annotation for AnnotationHub

AnnotationData for Synaptome.DB package

Annotation package for EpiTxDb objects

Annotation package for the Leishmania.major.Friedlin object

Annotation package for the Solanum.lycopersicum object

Annotation package for the Trypanosoma.brucei.TREU927 object

Annotation package for the Trypanosoma.cruzi.CLBrener.Esmeraldo object

Annotation package for TxDb object(s)

Annotation package for TxDb object(s) for Brachypodium distachyon (JGI version 3.1)

Annotation translation functions

A set of annotation maps describing the entire Gene Ontology

A set of annotation maps describing the entire PANTHER Gene Ontology

A visualization tool for single cell data of C.elegans embrogenesis

Base package for enabling powerful shiny web displays of Bioconductor objects

Build and access GenomicState objects for use with derfinder tools from sources like Gencode

Chromosomal DNA of Saccharomyces cerevisiae

Chromosome plus MT plus rDNA sequences for riz (based on ensembl)

Coliphage Phi-X174 Complete Genome

Contains the data files for analyzing MTA / ClariomD (mouse) arrays at the exon-level (PSR probeset ID) with the Sscore2 R package

Contains the data files for analyzing MTA / ClariomD (mouse) arrays at the gene-level (transcription cluster ID) with Sscore2 R package

Data package for JASPAR database (version 2020)

Data package for JASPAR database (version 2022)

Data package providing ATC codes

DBI to construct MeSH-related package from sqlite file

Ensembl based annotation package

Full Genome Sequence for Cryptococcus neoformans var. grubii KN99 (ASM221672v1)

Full genome sequences for Brachypodium distachyon (JGI version 3.0 assembly)

Full genome sequences for Caenorhabditis elegans (UCSC version ce10)

Full genome sequences for Drosophila mauritania (NCBI v1)

Full genome sequences for Drosophila melanogaster (flybase version dm3)

Full genome sequences for Homo sapiens (UCSC version hg19)

Full genome sequences for Homo sapiens (UCSC version hg38, based on GRCh38.p12) with injected major alleles (dbSNP151)

Full genome sequences for Homo sapiens (UCSC version hg38, based on GRCh38.p12) with injected minor alleles (dbSNP151)

Full genome sequences for Medicago truncatula (JCVI version Mt4.0v1)

Full genome sequences for P. falciparum 3D7

Full genome sequences for Zea mays PH207 (v1.0)

Full masked genome sequences for Mus musculus (UCSC version mm10)

Generate 'BART' File

Genome wide annotation for Myxococcus xanthus DK 1622

Greengenes 13.5 16S rRNA Database Annotation Data

Greengenes 13.8 85% similarity OTU threshold 16S rRNA Database Annotation Data

Greengenes 13.8 88% similarity OTU threshold 16S rRNA Database Annotation Data

Greengenes 13.8 91% similarity OTU threshold 16S rRNA Database Annotation Data

Greengenes 13.8 94% similarity OTU threshold 16S rRNA Database Annotation Data

Greengenes 13.8 97% similarity OTU threshold 16S rRNA Database Annotation Data

HMDB compound annotation package

homo_sapiens miRNA host gene definitions

Immunoglobulin Clonal Lineage and Diversity Analysis

Input data for the geneplast package

LymphoSeq annotation databases

mirhostgenes: putting miRNAs into genomic context

miRNASeq datasets from The Cancer Genome Atlas Project

Package for enabling powerful shiny web displays of Bioconductor objects

Platform Design Info for Affymetrix Atdschip_tiling

Platform Design Info for NimbleGen 081229_hg18_promoter_medip_hx1

Platform Design Info for NimbleGen 2006-07-18_mm8_refseq_promoter

Platform Design Info for NimbleGen 2006-10-31_rn34_refseq_promoter

Platform Design Info for NimbleGen feinberg_mm8_me_hx1

Platform Design Info for the CHARM DNA methylation microarray

Platform Design Info for the example charmData dataset

Precomputed data for crisprDesign

Pretrained models for scAnnotatR package

Probe sequence data for microarrays of type clariomdhuman

Probe sequence data for microarrays of type clarioms.human

Probe sequence data for microarrays of type clariomsmouse

Probe sequence data for microarrays of type clarioms.mouse

Probe sequence data for microarrays of type clarioms.rat

Probe sequence data for microarrays of type hta20

Probe sequence data for microarrays of type moex10stv1

Probe sequence data for microarrays of type mogene10stv1

Probe sequence data for microarrays of type mouse4302

Probe sequence data for microarrays of type mta10

Probe sequence data for microarrays of type rta10

Provides access to pathogen annotation resources available on EuPathDB databases

Reactome Function Interaction Annotation

RefSeq Gene Summaries

Ribosomal Database Project 16S rRNA release 11.5 Annotation Data

RPPA datasets from The Cancer Genome Atlas Project

SILVA SSR rRNA release 128.1 Annotation Data

SQANTI Explorer

Synamptosome Proteome Database

This package contains the annotation and network data sets

Tools for conducting enrichment analysis of MeSH

TopOnto ontology db package

UCSC RepeatMasker AnnotationHub resource metadata

Utilities to create and use an Ensembl based annotation database

Utilities to create and use Ensembl-based annotation databases

Viscello for Visualization of Single Cell Data

Viscello for Visualization of Single Cell EHT Data

waveTiling Example Data

Workflow for Identifying Regulatory Elements from Chromatin Accessibility Assay Data

Biocview "AnnotationData"

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