jotsetung/mirhostgenes: mirhostgenes: putting miRNAs into genomic context

This package provides functionality to define host genes for all miRNAs of a species and build and use the corresponding database and annotation packages. miRNAs are frequently encoded in introns of transcripts from, mostly protein coding, genes and exons of non-coding transcripts/genes. Such miRNAs are frequently co-transcribed with these host transcripts and their expression correlates to some extent with the expression of the mRNA from these primary transcription units.

Getting started

Package details

AuthorJ. Rainer
Bioconductor views AnnotationData Genetics
MaintainerJohannes Rainer <[email protected]>
LicenseMIT + file LICENSE
Version0.99.10
URL https://github.com/jotsetung/mirhostgenes
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("jotsetung/mirhostgenes")
jotsetung/mirhostgenes documentation built on Sept. 14, 2017, 9:52 a.m.