interactiveDisplay-methods: display: Open a Shiny application for a Bioconductor object

Description Usage Arguments Value Author(s) See Also Examples

Description

This opens a shiny visualization application in the browser based on the submitted object.

Usage

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display(object, ...)

Arguments

object

data object to display

...

additional arguments passed to methods; currently unused.

Value

Usually some variation of the initial input object, but it may be altered by the display widget (subset for example).

Author(s)

Shawn Balcome and Marc Carlson

See Also

http://bioconductor.org/packages/2.13/bioc/html/interactiveDisplay.html

Examples

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if(interactive()) {

## draw a RangedSummarizedExperiment object
data(se)
display(se)

## draw a GRanges object
data(mmgr)
display(mmgr)

## some display methods allow subsetting.
## To take advantage, just use an assignment operator like this:
mmgr2 <- display(mmgr)


## draw a GRangesList object
data(mmgrl)
display(mmgrl)

## draw an ExpressionSet object
data(expr)
display(expr)

## draw an MRexperiment object (placeholder!!!)
data(mr)
display(mr)

}

interactiveDisplay documentation built on Nov. 8, 2020, 6:31 p.m.