pcaGoPromoter: pcaGoPromoter is used to analyze DNA micro array data

This package contains functions to ease the analyses of DNA micro arrays. It utilizes principal component analysis as the initial multivariate analysis, followed by functional interpretation of the principal component dimensions with overrepresentation analysis for GO terms and regulatory interpretations using overrepresentation analysis of predicted transcription factor binding sites with the primo algorithm.

Package details

AuthorMorten Hansen, Jorgen Olsen
Bioconductor views GO GeneExpression Microarray Visualization
MaintainerMorten Hansen <mhansen@sund.ku.dk>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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pcaGoPromoter documentation built on Oct. 31, 2019, 5:31 a.m.