BgeeDB/BgeeDB_R: Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology

A package for the annotation and gene expression data download from Bgee database, and TopAnat analysis: GO-like enrichment of anatomical terms, mapped to genes by expression patterns.

Getting started

Package details

AuthorAndrea Komljenovic [aut, cre], Julien Roux [aut, cre]
Bioconductor views DataImport GO GeneExpression GeneSetEnrichment Microarray Sequencing Software
MaintainerJulien Wollbrett <julien.wollbrett@unil.ch>, Julien Roux <julien.roux@unibas.ch>, Andrea Komljenovic <andreakomljenovic@gmail.com>, Frederic Bastian <bgee@sib.swiss>
LicenseGPL-3 + file LICENSE
Version2.18.0
URL https://github.com/BgeeDB/BgeeDB_R
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("BgeeDB/BgeeDB_R")
BgeeDB/BgeeDB_R documentation built on June 12, 2021, 1:29 a.m.