deleteOldData: Delete .rds data of one species coming from an old version of...

In BgeeDB/BgeeDB_R: Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology

Delete .rds data of one species coming from an old version of the BgeeDB R package.

Description

Since Bioconductor 3.11 BgeeDB store data in a local SQLite database allowing to optimize memory usage. This function allows to delete .rds files used to store local data from BgeeDB versions older than Bioconductor 3.11, for the species selected in the reference class Bgee object.

Usage

deleteOldData(myBgeeObject)

Arguments

myBgeeObject

A Reference Class Bgee object, notably specifying the targeted species

Author(s)

Julien Wollbrett

Examples

{
  bgee <- Bgee$new(species = "Mus_musculus", dataType = "rna_seq")
  deleteOldData(bgee)
}

BgeeDB/BgeeDB_R documentation built on Jan. 14, 2024, 4:29 a.m.