targetGenes: Target Genes of Distal Regulatory Elements

In GSALightning: Fast Permutation-based Gene Set Analysis

Description

A list containing the target genes of 104636 distal regulatory elements from the human genome. The original list is available in the supplementary data of the reference stated below. The gene names has been tranformed to gene symbol already.

Usage

data("targetGenes")

Value

A list of distal regulatory elements and their target genes.

Source

http://nar.oxfordjournals.org/content/early/2013/09/03/nar.gkt785/suppl/DC1

References

Lu, Yulan, Yuanpeng Zhou, and Weidong Tian. "Combining Hi-C data with phylogenetic correlation to predict the target genes of distal regulatory elements in human genome." Nucleic acids research (2013): gkt785.

Examples

data(targetGenes)
str(targetGenes)

GSALightning documentation built on Nov. 8, 2020, 11 p.m.