GSALightning: Fast Permutation-based Gene Set Analysis

GSALightning provides a fast implementation of permutation-based gene set analysis for two-sample problem. This package is particularly useful when testing simultaneously a large number of gene sets, or when a large number of permutations is necessary for more accurate p-values estimation.

Package details

AuthorBilly Heung Wing Chang
Bioconductor views BiologicalQuestion DifferentialExpression GeneExpression GeneSetEnrichment Software Transcription
MaintainerBilly Heung Wing Chang <billyheungwing@gmail.com>
LicenseGPL (>=2)
Version1.16.0
URL https://github.com/billyhw/GSALightning
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("GSALightning")

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GSALightning documentation built on April 29, 2020, 3:36 a.m.