GSALightning: Fast Permutation-based Gene Set Analysis

GSALightning provides a fast implementation of permutation-based gene set analysis for two-sample problem. This package is particularly useful when testing simultaneously a large number of gene sets, or when a large number of permutations is necessary for more accurate p-values estimation.

AuthorBilly Heung Wing Chang
Date of publicationNone
MaintainerBilly Heung Wing Chang <billyheungwing@gmail.com>
LicenseGPL (>=2)
Version1.2.0
https://github.com/billyhw/GSALightning

View on Bioconductor

Files

GSALightning/DESCRIPTION
GSALightning/LICENSE
GSALightning/NAMESPACE
GSALightning/R
GSALightning/R/GSALightning.r
GSALightning/build
GSALightning/build/partial.rdb
GSALightning/build/vignette.rds
GSALightning/data
GSALightning/data/datalist
GSALightning/data/expression.rda
GSALightning/data/sampleInfo.rda
GSALightning/data/targetGenes.rda
GSALightning/inst
GSALightning/inst/NEWS
GSALightning/inst/doc
GSALightning/inst/doc/vignette.R
GSALightning/inst/doc/vignette.Rmd
GSALightning/inst/doc/vignette.html
GSALightning/man
GSALightning/man/GSALight.Rd GSALightning/man/GSALightning-package.Rd GSALightning/man/expression.Rd GSALightning/man/permTestLight.Rd GSALightning/man/sampleInfo.Rd GSALightning/man/targetGenes.Rd GSALightning/man/wilcoxTest.Rd
GSALightning/vignettes
GSALightning/vignettes/vignette.Rmd

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