Biocview "BiologicalQuestion"

An Implementation of Integrated Differential Expression and Differential Network Analysis for Biomarker Candidate Selection
An Implementation of Integrated Differential Expression and Differential Network Analysis for Biomarker Candidate Selection
An Implementation of Integrated Differential Expression and Differential Network Analysis for Biomarker Candidate Selection
An integrated analysis package of miRNA and mRNA expression data
An integrated analysis package of miRNA and mRNA expression data
An integrated analysis package of miRNA and mRNA expression data
annotation of noncoding RNAs and coexpressed genes
annotation of noncoding RNAs and coexpressed genes
An R package for quantitative integration and analysis of multiple omics assays from heterogeneous samples
An R package for quantitative integration and analysis of multiple omics assays from heterogeneous samples
A package of creating an algorithm of identifying microRNA-competing endogenous RNA triplets.
BASiNET - Classification of mRNA and lncRNA sequences using complex network theory
Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq)
Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq)
Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq)
Bayesian hierarchical model for genome-wide profiling of nucleosome positions based on high-throughput short-read data (MNase-Seq data)
ChIPanalyser: Predicting Transcription Factor Binding Sites
ChIPanalyser: Predicting Transcription Factor Binding Sites
Classification of RNA Sequences using Complex Network Theory
co-expression of lincRNAs and protein-coding genes
co-expression of lincRNAs and protein-coding genes
co-expression of lincRNAs and protein-coding genes
Decomposition of individual tumors into mutational signatures by signature refitting
Detection of consensus regions inside a group of experiences using genomic positions and genomic ranges
Detection of consensus regions inside a group of experiences using genomic positions and genomic ranges
Detection of consensus regions inside a group of experiences using genomic positions and genomic ranges
Exposome exploration and outcome data analysis
Exposome exploration and outcome data analysis
Exposome exploration and outcome data analysis
Fast Permutation-based Gene Set Analysis
Fast Permutation-based Gene Set Analysis
Fast Permutation-based Gene Set Analysis
Forward Genetic Simulation of Cancer Progression with Epistasis
Forward Genetic Simulation of Cancer Progression with Epistasis
Functions for Cytoscape Automation
Functions for the projection of weights from PCA, CoGAPS, NMF, correlation, and clustering
Functions for the projection of weights from PCA, CoGAPS, NMF, correlation, and clustering
Functions for the projection of weights from PCA, CoGAPS, NMF, correlation, and clustering
Gene Set Enrichment Analysis Extended to Contingency Cubes
Gene Set Enrichment Analysis Extended to Contingency Cubes
Long gene expression as a metric for neuronal identity
Metrics to estimate a level of similarity between two ChIP-Seq profiles
Metrics to estimate a level of similarity between two ChIP-Seq profiles
Metrics to estimate a level of similarity between two ChIP-Seq profiles
Network-based prioritization of putative metabolite IDs
Network-based prioritization of putative metabolite IDs
Network-based prioritization of putative metabolite IDs
Permutation-Based Analysis associating Conserved Differentially Methylated Elements Across Multiple Generations to a Treatment Effect
Permutation-Based Analysis associating Conserved Differentially Methylated Elements Across Multiple Generations to a Treatment Effect
R package of gene set enrichment analysis
Simulating Whole-Genome Inherited Bisulphite Sequencing Data
Simulating Whole-Genome Inherited Bisulphite Sequencing Data
Simulating Whole-Genome Inherited Bisulphite Sequencing Data
Test Single Package Builder
The Discordant Method: A Novel Approach for Differential Correlation
The Discordant Method: A Novel Approach for Differential Correlation
The Discordant Method: A Novel Approach for Differential Correlation
Transcription Factor High Accumulation Zones
Transcription Factor High Accumulation Zones
Transcription Factors Association Rules Miner
Transcription Factors Association Rules Miner
Transcription Factors Association Rules Miner
Yet Another Package for Signature Analysis
Yet Another Package for Signature Analysis
Yet Another Package for Signature Analysis
Yet Another Package for Signature Analysis