ArnaudDroitLab/RJMCMC: Bayesian hierarchical model for genome-wide profiling of nucleosome positions based on high-throughput short-read data (MNase-Seq data)

This package does nucleosome positioning using informative Multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling.

Getting started

Package details

AuthorRawane Samb, Khader Khadraoui, Pascal Belleau, Astrid Deschenes, Lajmi Lakhal-Chaieb and Arnaud Droit
Bioconductor views Bayesian BiologicalQuestion ChIPSeq NucleosomePositioning Software StatisticalMethod
MaintainerAstrid Deschenes <[email protected]>
LicenseArtistic-2.0
Version0.99.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("ArnaudDroitLab/RJMCMC")
ArnaudDroitLab/RJMCMC documentation built on Sept. 13, 2017, 5:48 a.m.