RJMCMCNucleosomes: Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq)

This package does nucleosome positioning using informative Multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling.

Package details

AuthorPascal Belleau [aut], Rawane Samb [aut], Astrid DeschĂȘnes [cre, aut], Khader Khadraoui [aut], Lajmi Lakhal-Chaieb [aut], Arnaud Droit [aut]
Bioconductor views Bayesian BiologicalQuestion ChIPSeq Coverage NucleosomePositioning Sequencing Software StatisticalMethod
MaintainerAstrid DeschĂȘnes <adeschen@hotmail.com>
URL https://github.com/ArnaudDroitLab/RJMCMCNucleosomes
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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RJMCMCNucleosomes documentation built on Nov. 8, 2020, 8:20 p.m.