billyhw/GSALightning: Fast Permutation-based Gene Set Analysis

GSALightning provides a fast implementation of permutation-based gene set analysis for two-sample problem. This package is particularly useful when testing simultaneously a large number of gene sets, or when a large number of permutations is necessary for more accurate p-values estimation.

Getting started

Package details

AuthorBilly Heung Wing Chang
Bioconductor views BiologicalQuestion DifferentialExpression GeneExpression GeneSetEnrichment Software Transcription
MaintainerBilly Heung Wing Chang <[email protected]>
LicenseGPL (>=2)
Version1.1.7
URL https://github.com/billyhw/GSALightning
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("billyhw/GSALightning")
billyhw/GSALightning documentation built on July 24, 2017, 11:43 a.m.