GSALightning-package: Fast Permutation-based Gene Set Analysis

In billyhw/GSALightning: Fast Permutation-based Gene Set Analysis

Description

GSALightning provides a fast implementation of permutation-based gene set analysis for two-sample problem. This package is particularly useful when testing simultaneously a large number of gene sets, or when a large number of permutations is necessary for more accurate p-values estimation.

Details

Index: This package was not yet installed at build time.

Author(s)

Billy Heung Wing Chang

Maintainer: Billy Heung Wing Chang <[e-mail]>

References

BHW Chang and W Tian (2015). GSA-Lightning: Ultra Fast Permutation-based Gene Set Analysis. Bioinformatics. doi: 10.1093/bioinformatics/btw349

B Efron and RJ Tibshirani (2007). "On testing the significance of sets of genes." The annals of applied statistics 1(1):107-129

See Also

GSALight, permTestLight.

billyhw/GSALightning documentation built on May 12, 2019, 9:22 p.m.