gaiac/TFARM: Transcription Factors Association Rules Miner

It searches for relevant associations of transcription factors with a transcription factor target, in specific genomic regions. It also allows to evaluate the Importance Index distribution of transcription factors (and combinations of transcription factors) in association rules.

Getting started

Package details

AuthorLiuba Nausicaa Martino, Alice Parodi, Gaia Ceddia, Piercesare Secchi, Stefano Campaner, Marco Masseroli
Bioconductor views BiologicalQuestion Infrastructure StatisticalMethod Transcription
MaintainerLiuba Nausicaa Martino <[email protected]>
LicenseArtistic-2.0
Version1.1.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("gaiac/TFARM")
gaiac/TFARM documentation built on April 30, 2018, 10:17 a.m.