GSReg: Gene Set Regulation (GS-Reg)

A package for gene set analysis based on the variability of expressions as well as a method to detect Alternative Splicing Events . It implements DIfferential RAnk Conservation (DIRAC) and gene set Expression Variation Analysis (EVA) methods. For detecting Differentially Spliced genes, it provides an implementation of the Spliced-EVA (SEVA).

Package details

AuthorBahman Afsari <bahman@jhu.edu>, Elana J. Fertig <ejfertig@jhmi.edu>
Bioconductor views AlternativeSplicing GeneExpression GeneRegulation GeneSetEnrichment GeneticVariability Pathways
MaintainerBahman Afsari <bahman@jhu.edu>, Elana J. Fertig <ejfertig@jhmi.edu>
LicenseGPL-2
Version1.24.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GSReg")

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GSReg documentation built on Nov. 8, 2020, 8:32 p.m.