Man pages for GUIDEseq
GUIDE-seq analysis pipeline
| annotateOffTargets | Annotate offtargets with gene name |
| combineOfftargets | Combine Offtargets |
| createBarcodeFasta | Create barcode as fasta file format for building bowtie1... |
| getPeaks | Obtain peaks from GUIDE-seq |
| getUniqueCleavageEvents | Using UMI sequence to obtain the starting sequence library |
| getUsedBarcodes | Create barcodes from the p5 and p7 index used for each... |
| GUIDEseqAnalysis | Analysis pipeline for GUIDE-seq dataset |
| GUIDEseq-package | Analysis of GUIDE-seq |
| mergePlusMinusPeaks | Merge peaks from plus strand and minus strand |
| offTargetAnalysisOfPeakRegions | Offtarget Analysis of GUIDE-seq peaks |
| peaks.gr | example cleavage sites |
| uniqueCleavageEvents | example unique cleavage sites |
